| Saturday 14th August 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 1-2 | Colne | |
| Tuesday 17th August 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 5-0 | Daisy Hill | |
| Saturday 21st August 1999 | F.A. Challenge Cup Preliminary Round | ||
|---|---|---|---|
| Cheadle Town | 0-3 | Warrington Town | |
| Tuesday 24th August 1999 | First Division | ||
|---|---|---|---|
| Squires Gate | 0-0 | Warrington Town | |
| Saturday 28th August 1999 | First Division | ||
|---|---|---|---|
| Formby | 3-2 | Warrington Town | |
| Monday 30th August 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 2-0 | Castleton Gabriels | |
| Saturday 4th September 1999 | F.A. Challenge Cup 1st Qualifying Round | ||
|---|---|---|---|
| Radcliffe Borough | 8-1 | Warrington Town | |
| Saturday 11th September 1999 | First Division | ||
|---|---|---|---|
| Ashton Town | 3-4 | Warrington Town | |
| Tuesday 14th September 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 3-1 | Squires Gate | |
| Saturday 18th September 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 0-0 | Curzon Ashton | |
| Saturday 25th September 1999 | First Division | ||
|---|---|---|---|
| Nelson | 2-1 | Warrington Town | |
| Saturday 2nd October 1999 | First Division | ||
|---|---|---|---|
| Castleton Gabriels | 3-3 | Warrington Town | |
| Tuesday 5th October 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 0-0 | Oldham Town | |
| Saturday 16th October 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 1-3 | Bacup Borough | |
| Saturday 23rd October 1999 | F.A. Carlsberg Vase 1st Round | ||
|---|---|---|---|
| Curzon Ashton | 3-3 | Warrington Town | |
| (After Extra Time, 2-2 after 90 mins) | |||
| Tuesday 26th October 1999 | F.A. Carlsberg Vase | ||
|---|---|---|---|
| Warrington Town | 3-1 | Curzon Ashton | |
| Saturday 30th October 1999 | First Division | ||
|---|---|---|---|
| Blackpool Mechanics | 1-4 | Warrington Town | |
| Tuesday 9th November 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 5-0 | Formby | |
| Saturday 13th November 1999 | F.A. Carlsberg Vase 2nd Round | ||
|---|---|---|---|
| Dunston Federation Brewery | 1-2 | Warrington Town | |
| Saturday 20th November 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 0-1 | Darwen | |
| Tuesday 30th November 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 2-3 | Woodley Sports | |
| Saturday 4th December 1999 | F.A. Carlsberg Vase 3rd Round | ||
|---|---|---|---|
| Vauxhall | 2-1 | Warrington Town | |
| Monday 27th December 1999 | First Division | ||
|---|---|---|---|
| Warrington Town | 0-2 | Tetley Walker | |
| Monday 3rd January 2000 | First Division | ||
|---|---|---|---|
| Alsager | 1-2 | Warrington Town | |
| Tuesday 11th January 2000 | First Division | ||
|---|---|---|---|
| Warrington Town | 2-0 | Alsager | |
| Saturday 15th January 2000 | First Division | ||
|---|---|---|---|
| Colne | 0-6 | Warrington Town | |
| Saturday 22nd January 2000 | First Division | ||
|---|---|---|---|
| Chadderton | 1-1 | Warrington Town | |
| Tuesday 25th January 2000 | First Division | ||
|---|---|---|---|
| Warrington Town | 2-0 | Blackpool Mechanics | |
| Saturday 12th February 2000 | First Division | ||
|---|---|---|---|
| Holker Old Boys | 2-2 | Warrington Town | |
| Saturday 19th February 2000 | First Division | ||
|---|---|---|---|
| Warrington Town | 4-0 | Ashton Town | |
| Saturday 26th February 2000 | First Division | ||
|---|---|---|---|
| Curzon Ashton | 3-2 | Warrington Town | |
| Saturday 4th March 2000 | First Division | ||
|---|---|---|---|
| Warrington Town | 1-1 | Holker Old Boys | |
| Saturday 11th March 2000 | First Division | ||
|---|---|---|---|
| Bacup Borough | 3-0 | Warrington Town | |
| Saturday 18th March 2000 | First Division | ||
|---|---|---|---|
| Warrington Town | 0-1 | Nelson | |
| Saturday 25th March 2000 | First Division | ||
|---|---|---|---|
| Oldham Town | 0-3 | Warrington Town | |
| Tuesday 28th March 2000 | First Division | ||
|---|---|---|---|
| Darwen | 1-3 | Warrington Town | |
| Saturday 1st April 2000 | First Division | ||
|---|---|---|---|
| Warrington Town | 1-1 | Chadderton | |
| Saturday 8th April 2000 | First Division | ||
|---|---|---|---|
| Woodley Sports | 3-0 | Warrington Town | |
| Saturday 15th April 2000 | First Division | ||
|---|---|---|---|
| Daisy Hill | 1-3 | Warrington Town | |
| Monday 24th April 2000 | First Division | ||
|---|---|---|---|
| Tetley Walker | 2-1 | Warrington Town | |
